EnhancerDB
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  3. rs17024865[chr1:110333210]
Enhancers that have rs17024865[chr1:110333210]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110323180 110341767 enh12126
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17024865[chr1:110333210]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110332243 110333216 ZNF274 GTRD no Bone Marrow (K562) 21327198
chr1 110332708 110333239 ZNF274 GTRD no Bone Marrow (K562) 21327199
chr1 110332731 110333281 ZNF274 GTRD no Bone Marrow (K562) 21327200
chr1 110332731 110333281 ZNF274 GTRD no Bone Marrow (K562) 107819513
chr1 110332859 110333221 ZNF274 GTRD no Bone Marrow (K562) 21327201
chr1 110332974 110333264 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21327202
chr1 110333207 110333219 GLI2 JASPAR yes 31438766
Genes associated with rs17024865[chr1:110333210], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More