EnhancerDB
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Enhancers that have rs17025047[chr1:110416028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs17025047[chr1:110416028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110415660 110416320 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328111
chr1 110415770 110416140 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328112
chr1 110415796 110416192 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328113
chr1 110415998 110416322 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328114
chr1 110416004 110416334 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328115
chr1 110416017 110416028 USF1 JASPAR yes 31448221
chr1 110416017 110416028 USF2 JASPAR yes 31448222
chr1 110416022 110416037 HNF4G JASPAR yes 31448223
chr1 110416023 110416037 NR2F1 JASPAR yes 31448224
chr1 110416023 110416038 HNF4A JASPAR yes 31448225
chr1 110416025 110416029 LFA1 TRANSFAC yes 31448226
Genes associated with rs17025047[chr1:110416028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More