EnhancerDB
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Enhancers that have rs17027172[chr1:8964389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8954605 8983075 enh11478
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs17027172[chr1:8964389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8963782 8964438 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107801992
chr1 8964387 8964396 SNAI2 JASPAR yes 26606731
chr1 8964387 8964397 FIGLA JASPAR yes 26606732
chr1 8964387 8964397 ID4 JASPAR yes 26606733
chr1 8964387 8964397 MSC JASPAR yes 26606734
chr1 8964387 8964397 TCF3 JASPAR yes 26606735
chr1 8964387 8964397 TCF4 JASPAR yes 26606736
Genes associated with rs17027172[chr1:8964389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More