EnhancerDB
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  3. rs17042040[chr1:212470027]
Enhancers that have rs17042040[chr1:212470027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212456045 212470579 enh910
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Stomach
Transcript factors that have rs17042040[chr1:212470027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212470022 212470040 NR3C1 JASPAR yes 35119492
chr1 212470023 212470035 TAL1 JASPAR yes 35119493
chr1 212470025 212470035 OLIG1 JASPAR yes 35119494
chr1 212470025 212470035 OLIG2 JASPAR yes 35119495
chr1 212470025 212470035 OLIG3 JASPAR yes 35119496
Genes associated with rs17042040[chr1:212470027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More