EnhancerDB
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  3. rs17049214[chr3:8545478]
Enhancers that have rs17049214[chr3:8545478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 8538945 8574055 enh35162
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs17049214[chr3:8545478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 8545472 8545486 NR2F1 JASPAR yes 297709
chr3 8545474 8545488 TLX1 JASPAR yes 297710
Genes associated with rs17049214[chr3:8545478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 8543393 8609805 + LMCD1 ENSG00000071282.7 8543393 0 Heart 0.221895 3372