EnhancerDB
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  3. rs17049224[chr3:8552038]
Enhancers that have rs17049224[chr3:8552038]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 8538945 8574055 enh35162
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs17049224[chr3:8552038]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 8552030 8552038 HOXA5 JASPAR yes 298708
chr3 8552036 8552045 THAP1 JASPAR yes 298709
chr3 8552036 8552051 HNF4G JASPAR yes 298710
chr3 8552036 8552051 NR2C2 JASPAR yes 298711
chr3 8552037 8552051 NR2F1 JASPAR yes 298712
chr3 8552037 8552051 RXRB JASPAR yes 298713
chr3 8552037 8552051 RXRG JASPAR yes 298714
chr3 8552037 8552052 HNF4A JASPAR yes 298715
Genes associated with rs17049224[chr3:8552038], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More