EnhancerDB
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Enhancers that have rs17097002[chr12:46940981]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs17097002[chr12:46940981]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46940512 46941172 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21542282
chr12 46940706 46940985 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21542283
chr12 46940731 46941051 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21542284
chr12 46940776 46941016 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21542285
chr12 46940790 46940981 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21542286
chr12 46940971 46940981 ID4 JASPAR yes 120635985
chr12 46940971 46940981 NHLH1 JASPAR yes 120635986
chr12 46940971 46940981 TCF3 JASPAR yes 120635987
chr12 46940971 46940981 TCF4 JASPAR yes 120635988
chr12 46940972 46940981 SNAI2 JASPAR yes 120635989
chr12 46940977 46940983 ATF1 TRANSFAC yes 120635991
Genes associated with rs17097002[chr12:46940981], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More