EnhancerDB
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Enhancers that have rs17110316[chr1:54764933]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs17110316[chr1:54764933]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54763077 54767289 ZNF274 GTRD no Bone Marrow (K562) 107804699
chr1 54763077 54767289 ZNF274 GTRD no Bone Marrow (K562) 107804700
chr1 54763095 54765406 ZNF274 GTRD no Bone Marrow (K562) 107804701
chr1 54763163 54765510 ZNF274 GTRD no Bone Marrow (K562) 107804702
chr1 54763333 54765291 ZNF274 GTRD no Bone Marrow (K562) 107804703
chr1 54763359 54765366 ZNF274 GTRD no Blood (GM12878) 107804704
chr1 54763388 54766404 ZNF274 GTRD no Bone Marrow (K562) 107804705
chr1 54763388 54766404 ZNF274 GTRD no Bone Marrow (K562) 107804706
chr1 54763452 54765312 ZNF274 GTRD no Bone Marrow (K562) 107804707
chr1 54763459 54765412 ZNF274 GTRD no Bone Marrow (K562) 107804708
chr1 54763482 54765237 ZNF274 GTRD no Bone Marrow (K562) 107804709
chr1 54763494 54765480 ZNF274 GTRD no Blood (GM12878) 107804710
chr1 54763541 54765210 ZNF274 GTRD no Blood (GM12878) 107804711
chr1 54763557 54765348 ZNF274 GTRD no Liver (HepG2) 107804712
chr1 54763566 54765234 ZNF274 GTRD no Blood (GM12878) 107804713
chr1 54763573 54765363 ZNF274 GTRD no Blood (GM12878) 107804714
chr1 54763579 54765252 ZNF274 GTRD no Bone Marrow (K562) 107804715
chr1 54763601 54765326 ZNF274 GTRD no Blood (GM12878) 107804716
chr1 54763602 54765347 ZNF274 GTRD no Liver (HepG2) 107804717
chr1 54763605 54765266 ZNF274 GTRD no Blood (GM12878) 107804718
chr1 54763653 54765250 ZNF274 GTRD no Blood (GM12878) 107804719
chr1 54763671 54765265 ZNF274 GTRD no Bone Marrow (K562) 107804720
chr1 54763671 54766180 ZNF143 GTRD no Epithelial (MCF-7) 107804721
chr1 54763714 54765253 ZNF274 GTRD no Cervix (HeLa-S3) 107804722
chr1 54763752 54765195 ZNF274 GTRD no Bone Marrow (K562) 107804723
chr1 54763765 54765244 ZNF274 GTRD no Liver (HepG2) 107804724
chr1 54763787 54765266 ZNF274 GTRD no Cervix (HeLa-S3) 107804725
chr1 54763797 54765254 ZBTB33 GTRD no Lung (A549) 107804726
chr1 54763797 54765266 ZNF274 GTRD no Cervix (HeLa-S3) 107804727
chr1 54763839 54765301 ZNF143 GTRD no Epithelial (MCF-7) 107804728
chr1 54763839 54765321 ZBTB33 GTRD no Brain (SK-N-SH) 107804729
chr1 54763854 54765346 ZBTB33 GTRD no Lung (A549) 107804730
chr1 54763864 54765405 ZNF143 GTRD no Epithelial (MCF-7) 107804731
chr1 54763879 54765208 ZNF274 GTRD no Liver (HepG2) 107804732
chr1 54763884 54765306 ZBTB33 GTRD no Lung (A549) 107804733
chr1 54763896 54765249 ZNF274 GTRD no Liver (HepG2) 107804734
chr1 54763897 54765266 ZBTB33 GTRD no Lung (A549) 107804735
chr1 54763902 54765203 TCF7L2 GTRD no Colon (HCT116) 107804736
chr1 54763917 54765202 ZBTB33 GTRD no Brain (SK-N-SH) 107804737
chr1 54763920 54765195 ZNF274 GTRD no Liver (HepG2) 107804738
chr1 54763935 54765332 ZNF274 GTRD no Liver (HepG2) 107804739
chr1 54763944 54765196 ZNF274 GTRD no Bone Marrow (K562) 107804740
chr1 54763976 54765198 ZNF274 GTRD no Bone Marrow (K562) 107804741
chr1 54764039 54765275 ZNF274 GTRD no Liver (HepG2) 107804742
chr1 54764067 54765386 ZNF143 GTRD no Epithelial (MCF-7) 107804743
chr1 54764081 54765377 ZNF274 GTRD no Liver (HepG2) 107804744
chr1 54764095 54765263 ZNF274 GTRD no Cervix (HeLa-S3) 107804745
chr1 54764101 54765223 ZBTB33 GTRD no Brain (SK-N-SH) 107804746
chr1 54764125 54765219 ZNF274 GTRD no Bone Marrow (K562) 107804747
chr1 54764131 54765245 ZNF274 GTRD no Blood (GM12878) 107804748
chr1 54764146 54765316 ZNF274 GTRD no Bone Marrow (K562) 107804749
chr1 54764154 54765216 ZNF274 GTRD no Cervix (HeLa-S3) 107804750
chr1 54764170 54765227 ZNF274 GTRD no Liver (HepG2) 107804751
chr1 54764237 54765320 ZNF274 GTRD no Blood (GM12878) 107804752
chr1 54764242 54765188 ZNF274 GTRD no Bone Marrow (K562) 107804753
chr1 54764243 54765466 ZNF143 GTRD no Epithelial (MCF-7) 107804754
chr1 54764253 54765208 ZNF274 GTRD no Blood (GM12878) 107804755
chr1 54764296 54765249 ZNF274 GTRD no Liver (HepG2) 107804756
chr1 54764314 54765192 ZNF143 GTRD no Epithelial (MCF-7) 107804757
chr1 54764319 54765234 ZNF274 GTRD no Cervix (HeLa-S3) 107804758
chr1 54764339 54765195 ZNF274 GTRD no Liver (HepG2) 107804759
chr1 54764344 54765269 ZNF274 GTRD no Cervix (HeLa-S3) 107804760
chr1 54764344 54765327 ZNF274 GTRD no Bone Marrow (K562) 107804761
chr1 54764366 54765206 ZNF274 GTRD no Bone Marrow (K562) 107804762
chr1 54764369 54765241 ZBTB33 GTRD no Brain (SK-N-SH) 107804763
chr1 54764373 54765209 ZNF274 GTRD no Cervix (HeLa-S3) 107804764
chr1 54764382 54765260 ZNF274 GTRD no Liver (HepG2) 107804765
chr1 54764403 54765381 ZNF143 GTRD no Epithelial (MCF-7) 107804766
chr1 54764416 54765281 ZNF143 GTRD no Epithelial (MCF-7) 107804767
chr1 54764429 54765195 ZNF274 GTRD no Cervix (HeLa-S3) 107804768
chr1 54764551 54765283 ZNF143 GTRD no Epithelial (MCF-7) 107804769
chr1 54764794 54765202 ZBTB33 GTRD no Lung (A549) 107804770
chr1 54764926 54764936 NFATC3 JASPAR yes 28970354
chr1 54764928 54764934 ETS1 JASPAR yes 28970355
chr1 54764928 54764942 PAX6 JASPAR yes 28970356
Genes associated with rs17110316[chr1:54764933], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More