EnhancerDB
  1. Home
  2. SNP
  3. rs17111727[chr5:150455442]
Enhancers that have rs17111727[chr5:150455442]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 150446018 150466235 enh22725
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
chr5 150455023 150455538 vista49692
VISTA
Transcript factors that have rs17111727[chr5:150455442]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 150455440 150455451 NFE2 JASPAR yes 66910597
chr5 150455440 150455451 NFE2 JASPAR yes 70740472
chr5 150455440 150455452 PROX1 JASPAR yes 66910598
chr5 150455440 150455452 PROX1 JASPAR yes 70740473
Genes associated with rs17111727[chr5:150455442], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 149980642 150038782 + SYNPO ENSG00000171992.8 149980642 416660 Thyroid 0.00244959 5883