EnhancerDB
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  3. rs17116421[chr5:154154018]
Enhancers that have rs17116421[chr5:154154018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 154145125 154165844 enh8815
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17116421[chr5:154154018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 154154005 154154020 TFAP2C JASPAR yes 67057234
chr5 154154018 154154023 GATA2 JASPAR yes 67057235
Genes associated with rs17116421[chr5:154154018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More