EnhancerDB
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  3. rs17126440[chr12:52601500]
Enhancers that have rs17126440[chr12:52601500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17126440[chr12:52601500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52600790 52601632 TCF7L2 GTRD no Colon (HCT116) 21546663
chr12 52600892 52601554 TCF7L2 GTRD no Colon (HCT116) 21546666
chr12 52600914 52601614 TCF7L2 GTRD no Colon (HCT116) 21546667
chr12 52601000 52601620 TCF7L2 GTRD no Colon (HCT116) 21546668
chr12 52601221 52601871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546670
chr12 52601451 52602101 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546671
chr12 52601488 52601500 PKNOX1 JASPAR yes 120928017
chr12 52601488 52601500 PKNOX2 JASPAR yes 120928018
chr12 52601488 52601500 TGIF1 JASPAR yes 120928019
chr12 52601488 52601500 TGIF2 JASPAR yes 120928020
chr12 52601498 52601502 YY1 TRANSFAC yes 120928021
Genes associated with rs17126440[chr12:52601500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More