EnhancerDB
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  3. rs17126443[chr12:52603311]
Enhancers that have rs17126443[chr12:52603311]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17126443[chr12:52603311]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52603096 52603826 TCF7L2 GTRD no Colon (HCT116) 21546697
chr12 52603289 52603593 TCF7L2 GTRD no Colon (HCT116) 21546698
chr12 52603309 52603313 NFE TRANSFAC yes 120928246
chr12 52603310 52603322 PKNOX1 JASPAR yes 120928247
chr12 52603310 52603322 PKNOX2 JASPAR yes 120928248
chr12 52603310 52603322 TGIF1 JASPAR yes 120928249
chr12 52603310 52603322 TGIF2 JASPAR yes 120928250
chr12 52603311 52603320 SNAI2 JASPAR yes 120928251
chr12 52603311 52603321 ID4 JASPAR yes 120928252
chr12 52603311 52603321 SREBF2 JASPAR yes 120928253
Genes associated with rs17126443[chr12:52603311], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More