EnhancerDB
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  3. rs171326[chr1:229004119]
Enhancers that have rs171326[chr1:229004119]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228982305 229013678 enh12753
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Astrocyte Lung (A549) Stomach Placenta Breast Uterus Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs171326[chr1:229004119]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229002735 229004430 ZNF274 GTRD no Liver (HepG2) 21389133
chr1 229002789 229004539 ZNF274 GTRD no Liver (HepG2) 21389134
chr1 229003105 229004204 ZNF143 GTRD no Epithelial (MCF-7) 21389137
chr1 229003178 229004391 ZNF143 GTRD no Epithelial (MCF-7) 21389138
chr1 229003189 229004229 ZNF143 GTRD no Epithelial (MCF-7) 21389139
chr1 229003195 229004156 ZNF143 GTRD no Epithelial (MCF-7) 21389140
chr1 229003211 229004179 ZNF143 GTRD no Epithelial (MCF-7) 21389141
chr1 229003230 229004178 ZNF274 GTRD no Liver (HepG2) 21389142
chr1 229003242 229004141 ZNF143 GTRD no Epithelial (MCF-7) 21389143
chr1 229003252 229004202 ZNF274 GTRD no Liver (HepG2) 21389144
chr1 229003253 229004187 ZNF274 GTRD no Liver (HepG2) 21389145
chr1 229003257 229004188 ZNF274 GTRD no Liver (HepG2) 21389146
chr1 229003267 229004226 ZNF143 GTRD no Epithelial (MCF-7) 21389147
chr1 229003293 229004248 ZNF143 GTRD no Epithelial (MCF-7) 21389148
chr1 229003296 229004150 ZNF143 GTRD no Epithelial (MCF-7) 21389150
chr1 229003298 229004263 ZNF143 GTRD no Epithelial (MCF-7) 21389151
chr1 229003316 229004155 ZNF274 GTRD no Liver (HepG2) 21389152
chr1 229003320 229004373 ZNF274 GTRD no Liver (HepG2) 21389153
chr1 229003327 229004140 ZNF274 GTRD no Liver (HepG2) 21389155
chr1 229003339 229004178 ZNF274 GTRD no Liver (HepG2) 21389156
chr1 229003341 229004394 ZNF274 GTRD no Liver (HepG2) 21389157
chr1 229003358 229004168 ZNF274 GTRD no Liver (HepG2) 21389162
chr1 229003370 229004133 ZNF274 GTRD no Liver (HepG2) 21389165
chr1 229003392 229004195 ZNF274 GTRD no Liver (HepG2) 21389166
chr1 229003472 229004372 ZNF274 GTRD no Liver (HepG2) 21389172
chr1 229003486 229004159 ZNF274 GTRD no Liver (HepG2) 21389175
chr1 229003595 229004121 ZNF143 GTRD no Epithelial (MCF-7) 21389180
chr1 229004118 229004132 TLX1 JASPAR yes 35938362
Genes associated with rs171326[chr1:229004119], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More