EnhancerDB
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  3. rs17195754[chr6:30720567]
Enhancers that have rs17195754[chr6:30720567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 30720004 30720713 vista51531
VISTA
Transcript factors that have rs17195754[chr6:30720567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30719927 30720795 POLR2A UCSC Txn Factor no Conserved 108539500
chr6 30720558 30720573 PRDM1 JASPAR yes 70343970
chr6 30720558 30720573 STAT2 JASPAR yes 70343971
chr6 30720558 30720573 PRDM1 JASPAR yes 101044398
chr6 30720558 30720573 STAT2 JASPAR yes 101044399
chr6 30720559 30720573 STAT1 JASPAR yes 70343972
chr6 30720559 30720573 STAT1 JASPAR yes 101044400
Genes associated with rs17195754[chr6:30720567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More