EnhancerDB
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  3. rs17205955[chr19:6059513]
Enhancers that have rs17205955[chr19:6059513]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6055365 6071655 enh17885
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs17205955[chr19:6059513]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6058968 6062945 ZNF274 GTRD no Bone Marrow (K562) 21844175
chr19 6058968 6062945 ZNF274 GTRD no Bone Marrow (K562) 108376525
chr19 6058968 6062945 ZNF274 GTRD no Bone Marrow (K562) 108376526
chr19 6059085 6062947 ZNF274 GTRD no Bone Marrow (K562) 21844176
chr19 6059085 6062947 ZNF274 GTRD no Bone Marrow (K562) 108376527
chr19 6059085 6062947 ZNF274 GTRD no Bone Marrow (K562) 108376528
chr19 6059407 6062042 ZNF274 GTRD no Bone Marrow (K562) 21844177
chr19 6059407 6062042 ZNF274 GTRD no Bone Marrow (K562) 108376529
chr19 6059509 6059526 BCL6B JASPAR yes 112253174
chr19 6059510 6059525 STAT1 JASPAR yes 112253175
chr19 6059511 6061767 ZNF274 GTRD no Bone Marrow (K562) 21844178
chr19 6059511 6061767 ZNF274 GTRD no Bone Marrow (K562) 108376530
chr19 6059512 6059523 STAT1 JASPAR yes 112253176
chr19 6059512 6059523 STAT3 JASPAR yes 112253177
Genes associated with rs17205955[chr19:6059513], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More