EnhancerDB
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  3. rs17223244[chr12:65019900]
Enhancers that have rs17223244[chr12:65019900]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr12 65019058 65019979 vista13800
VISTA
Transcript factors that have rs17223244[chr12:65019900]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65019351 65019947 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21552864
chr12 65019351 65019947 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108041867
chr12 65019387 65019983 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21552866
chr12 65019387 65019983 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108041870
chr12 65019399 65019989 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21552870
chr12 65019399 65019989 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108041874
chr12 65019618 65020189 MYOD GTRD no Muscle (Myoblast) 108041891
chr12 65019893 65019909 POU4F2 JASPAR yes 82422522
chr12 65019893 65019909 POU4F2 JASPAR yes 121417521
chr12 65019895 65019913 NFYA JASPAR yes 82422523
chr12 65019895 65019913 NFYA JASPAR yes 121417522
chr12 65019898 65019914 NFYA JASPAR yes 82422524
chr12 65019898 65019914 NFYA JASPAR yes 121417523
chr12 65019899 65019909 HOXA13 JASPAR yes 82422525
chr12 65019899 65019909 HOXB13 JASPAR yes 82422526
chr12 65019899 65019909 HOXD13 JASPAR yes 82422527
chr12 65019899 65019909 HOXA13 JASPAR yes 121417524
chr12 65019899 65019909 HOXB13 JASPAR yes 121417525
chr12 65019899 65019909 HOXD13 JASPAR yes 121417526
chr12 65019899 65019910 HOXA10 JASPAR yes 82422528
chr12 65019899 65019910 HOXA10 JASPAR yes 121417527
chr12 65019900 65019910 ALX3 JASPAR yes 82422529
chr12 65019900 65019910 ESX1 JASPAR yes 82422530
chr12 65019900 65019910 GBX2 JASPAR yes 82422531
chr12 65019900 65019910 GSX1 JASPAR yes 82422532
chr12 65019900 65019910 GSX2 JASPAR yes 82422533
chr12 65019900 65019910 HESX1 JASPAR yes 82422534
chr12 65019900 65019910 LBX2 JASPAR yes 82422535
chr12 65019900 65019910 LHX2 JASPAR yes 82422536
chr12 65019900 65019910 MIXL1 JASPAR yes 82422537
chr12 65019900 65019910 MNX1 JASPAR yes 82422538
chr12 65019900 65019910 RAX JASPAR yes 82422539
chr12 65019900 65019910 ALX3 JASPAR yes 121417528
chr12 65019900 65019910 ESX1 JASPAR yes 121417529
chr12 65019900 65019910 GBX2 JASPAR yes 121417530
chr12 65019900 65019910 GSX1 JASPAR yes 121417531
chr12 65019900 65019910 GSX2 JASPAR yes 121417532
chr12 65019900 65019910 HESX1 JASPAR yes 121417533
chr12 65019900 65019910 LBX2 JASPAR yes 121417534
chr12 65019900 65019910 LHX2 JASPAR yes 121417535
chr12 65019900 65019910 MIXL1 JASPAR yes 121417536
chr12 65019900 65019910 MNX1 JASPAR yes 121417537
chr12 65019900 65019910 RAX JASPAR yes 121417538
Genes associated with rs17223244[chr12:65019900], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More