EnhancerDB
  1. Home
  2. SNP
  3. rs1728231[chr1:113577956]
Enhancers that have rs1728231[chr1:113577956]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113567665 113592895 enh12156
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs1728231[chr1:113577956]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113577645 113578161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21329852
chr1 113577942 113577956 TLX1 JASPAR yes 31610319
chr1 113577943 113577957 TLX1 JASPAR yes 31610320
chr1 113577949 113577958 NFIX JASPAR yes 31610321
chr1 113577949 113577959 NFIA JASPAR yes 31610322
chr1 113577951 113577957 NFIC JASPAR yes 31610323
Genes associated with rs1728231[chr1:113577956], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More