EnhancerDB
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  3. rs17296436[chr10:33561560]
Enhancers that have rs17296436[chr10:33561560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 33559785 33571015 enh13138
Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17296436[chr10:33561560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 33561149 33561679 ZNF143 GTRD no Epithelial (MCF-7) 21428691
chr10 33561149 33561679 ZNF143 GTRD no Epithelial (MCF-7) 107908714
chr10 33561163 33561658 ZNF263 UCSC Txn Factor no Conserved 107908715
chr10 33561181 33561621 ZNF143 GTRD no Epithelial (MCF-7) 21428692
chr10 33561181 33561621 ZNF143 GTRD no Epithelial (MCF-7) 107908716
chr10 33561559 33561569 GSX2 JASPAR yes 126588526
Genes associated with rs17296436[chr10:33561560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More