EnhancerDB
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  3. rs17398598[chr1:52024908]
Enhancers that have rs17398598[chr1:52024908]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs17398598[chr1:52024908]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52024900 52024915 STAT1 JASPAR yes 28850568
chr1 52024900 52024918 SRF JASPAR yes 28850569
chr1 52024902 52024913 STAT1 JASPAR yes 28850570
chr1 52024902 52024913 STAT3 JASPAR yes 28850571
chr1 52024905 52024909 H1TF2 TRANSFAC yes 28850572
chr1 52024905 52024909 NFE TRANSFAC yes 28850573
chr1 52024905 52024909 SRF TRANSFAC yes 28850574
chr1 52024905 52024915 HOXA13 JASPAR yes 28850575
Genes associated with rs17398598[chr1:52024908], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More