EnhancerDB
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  3. rs17522849[chr12:122231044]
Enhancers that have rs17522849[chr12:122231044]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs17522849[chr12:122231044]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122229445 122231065 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21579500
chr12 122229445 122231065 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108065673
chr12 122229445 122242257 POLR2A UCSC Txn Factor no Conserved 108065674
chr12 122231030 122231044 GLIS2 JASPAR yes 124247259
chr12 122231030 122231044 ZIC1 JASPAR yes 124247260
chr12 122231030 122231045 ZIC3 JASPAR yes 124247261
chr12 122231030 122231045 ZIC4 JASPAR yes 124247262
chr12 122231040 122231051 NRF1 JASPAR yes 124247264
chr12 122231041 122231052 NRF1 JASPAR yes 124247265
Genes associated with rs17522849[chr12:122231044], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More