EnhancerDB
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  3. rs17539260[chr6:111751365]
Enhancers that have rs17539260[chr6:111751365]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 111737229 111755635 enh9318
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs17539260[chr6:111751365]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 111751358 111751368 GSC2 JASPAR yes 104342747
chr6 111751358 111751368 GSC JASPAR yes 104342748
chr6 111751359 111751367 OTX1 JASPAR yes 104342749
chr6 111751359 111751368 PITX3 JASPAR yes 104342750
Genes associated with rs17539260[chr6:111751365], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More