EnhancerDB
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  3. rs17539452[chr5:148292786]
Enhancers that have rs17539452[chr5:148292786]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148282079 148299015 enh22690
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
chr5 148292484 148292904 vista49575
VISTA
Transcript factors that have rs17539452[chr5:148292786]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148292610 148292986 YY1 UCSC Txn Factor no Conserved 108536881
chr5 148292647 148292962 STAT3 UCSC Txn Factor no Conserved 108536882
chr5 148292681 148292937 FOS UCSC Txn Factor no Conserved 108536883
chr5 148292721 148292898 TEAD4 UCSC Txn Factor no Conserved 108536884
chr5 148292778 148292792 XBP1 JASPAR yes 66773026
chr5 148292778 148292792 XBP1 JASPAR yes 70735353
chr5 148292779 148292793 CREB3 JASPAR yes 66773027
chr5 148292779 148292793 CREB3 JASPAR yes 70735354
chr5 148292784 148292789 ATF1 TRANSFAC yes 66773028
chr5 148292784 148292789 ATF1 TRANSFAC yes 70735355
Genes associated with rs17539452[chr5:148292786], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More