EnhancerDB
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  3. rs17558869[chr1:225632485]
Enhancers that have rs17558869[chr1:225632485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17558869[chr1:225632485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225632204 225632577 TCF7L2 GTRD no Colon (HCT116) 21384649
chr1 225632332 225632908 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384650
chr1 225632429 225632919 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384651
chr1 225632439 225632955 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384652
chr1 225632477 225632486 SRY JASPAR yes 35740891
Genes associated with rs17558869[chr1:225632485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More