EnhancerDB
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  3. rs17618545[chr6:13397998]
Enhancers that have rs17618545[chr6:13397998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13393585 13416889 enh8961
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17618545[chr6:13397998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13397990 13398004 CREB3L1 JASPAR yes 100025426
chr6 13397991 13398001 MAX JASPAR yes 100025427
chr6 13397992 13398002 HEY1 JASPAR yes 100025428
chr6 13397992 13398002 HEY2 JASPAR yes 100025429
chr6 13397992 13398002 MAX JASPAR yes 100025430
chr6 13397992 13398002 MNT JASPAR yes 100025431
chr6 13397992 13398003 USF1 JASPAR yes 100025432
chr6 13397993 13398000 USF1 JASPAR yes 100025433
chr6 13397993 13398003 MAX JASPAR yes 100025434
chr6 13397994 13397999 MYC TRANSFAC yes 100025435
chr6 13397994 13397999 USF1 TRANSFAC yes 100025436
chr6 13397994 13397999 USF2 TRANSFAC yes 100025437
chr6 13397994 13398001 USF1 JASPAR yes 100025438
Genes associated with rs17618545[chr6:13397998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More