EnhancerDB
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  3. rs17703031[chr16:25052378]
Enhancers that have rs17703031[chr16:25052378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 25036065 25069195 enh3955
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs17703031[chr16:25052378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25051060 25052740 AR GTRD no Prostate (PC-3) 21699846
chr16 25051140 25052566 ZNF274 GTRD no Blood (GM12878) 21699848
chr16 25051143 25052604 ZNF274 GTRD no Blood (GM12878) 21699849
chr16 25051170 25052710 ZNF274 GTRD no Blood (GM12878) 21699851
chr16 25051178 25052748 ZNF274 GTRD no Blood (GM12878) 21699852
chr16 25051185 25052792 ZNF274 GTRD no Blood (GM12878) 21699853
chr16 25051264 25052519 ZNF274 GTRD no Blood (GM12878) 21699856
chr16 25051265 25052482 ZNF274 GTRD no Blood (GM12878) 21699857
chr16 25051289 25052599 ZNF274 GTRD no Blood (GM12878) 21699859
chr16 25051324 25052635 ZNF274 GTRD no Blood (GM12878) 21699863
chr16 25051325 25052426 ZNF274 GTRD no Blood (GM12878) 21699864
chr16 25051817 25052395 ZNF274 GTRD no Bone Marrow (K562) 21699879
chr16 25051833 25052716 ZNF274 GTRD no Bone Marrow (K562) 21699882
chr16 25052083 25052554 ZNF274 GTRD no Blood (GM12878) 21699899
chr16 25052345 25052825 ZNF274 GTRD no Bone Marrow (K562) 21699900
chr16 25052366 25052380 E2F7 JASPAR yes 10098542
chr16 25052373 25052382 NKX3-2 JASPAR yes 10098543
chr16 25052374 25052382 ISL2 JASPAR yes 10098544
chr16 25052374 25052390 POU4F2 JASPAR yes 10098545
chr16 25052374 25052390 POU4F3 JASPAR yes 10098546
chr16 25052376 25052390 POU4F1 JASPAR yes 10098547
chr16 25052376 25052391 HNF1A JASPAR yes 10098548
chr16 25052377 25052390 HNF1B JASPAR yes 10098549
chr16 25052377 25052391 POU4F1 JASPAR yes 10098550
Genes associated with rs17703031[chr16:25052378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 24930706 25026987 - ARHGAP17 ENSG00000140750.12 25026987 25391 Lung 0.348227 14660