EnhancerDB
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  3. rs17708223[chr17:38680594]
Enhancers that have rs17708223[chr17:38680594]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17708223[chr17:38680594]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38680393 38680946 ZNF143 GTRD no Epithelial (MCF-7) 21754967
chr17 38680393 38680946 ZNF143 GTRD no Epithelial (MCF-7) 108255563
chr17 38680427 38680960 ZNF274 GTRD no Blood (GM12878) 21754968
chr17 38680427 38680960 ZNF274 GTRD no Blood (GM12878) 108255564
chr17 38680524 38680809 ZNF274 GTRD no Bone Marrow (K562) 21754969
chr17 38680593 38680603 MZF1 JASPAR yes 54221343
Genes associated with rs17708223[chr17:38680594], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More