EnhancerDB
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  3. rs17761545[chr17:55501385]
Enhancers that have rs17761545[chr17:55501385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17761545[chr17:55501385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55501377 55501387 HOXA13 JASPAR yes 54953999
chr17 55501377 55501387 HOXB13 JASPAR yes 54954000
chr17 55501377 55501387 HOXD13 JASPAR yes 54954001
chr17 55501377 55501388 HOXA10 JASPAR yes 54954002
chr17 55501378 55501387 CDX1 JASPAR yes 54954003
chr17 55501378 55501389 CDX2 JASPAR yes 54954004
Genes associated with rs17761545[chr17:55501385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More