EnhancerDB
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  3. rs17778162[chr17:25850509]
Enhancers that have rs17778162[chr17:25850509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs17778162[chr17:25850509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25850503 25850518 PRDM1 JASPAR yes 53640628
chr17 25850506 25850511 TFAP2A TRANSFAC yes 53640629
chr17 25850506 25850512 MZF1 JASPAR yes 53640630
Genes associated with rs17778162[chr17:25850509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More