EnhancerDB
  1. Home
  2. SNP
  3. rs1778020[chr1:113578549]
Enhancers that have rs1778020[chr1:113578549]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113567665 113592895 enh12156
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs1778020[chr1:113578549]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113578532 113578553 IRF1 JASPAR yes 31610410
chr1 113578534 113578549 PRDM1 JASPAR yes 31610411
chr1 113578538 113578553 MEF2C JASPAR yes 31610412
chr1 113578547 113578562 LEF1 JASPAR yes 31610413
chr1 113578548 113578562 GATA2 JASPAR yes 31610414
Genes associated with rs1778020[chr1:113578549], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More