EnhancerDB
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  3. rs1779410[chr1:205248759]
Enhancers that have rs1779410[chr1:205248759]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs1779410[chr1:205248759]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205246524 205250029 ZNF274 GTRD no Bone Marrow (K562) 21371215
chr1 205246593 205250269 ZNF274 GTRD no Cervix (HeLa-S3) 21371216
chr1 205247161 205248799 ZNF274 GTRD no Cervix (HeLa-S3) 21371231
chr1 205247337 205250086 ZNF143 GTRD no Epithelial (MCF-7) 21371235
chr1 205247390 205249048 ZNF274 GTRD no Cervix (HeLa-S3) 21371236
chr1 205247742 205250034 ZNF143 GTRD no Epithelial (MCF-7) 21371240
chr1 205248462 205251020 ZNF143 GTRD no Epithelial (MCF-7) 21371243
chr1 205248482 205249842 ZNF274 GTRD no Bone Marrow (K562) 21371244
chr1 205248606 205249721 ZNF274 GTRD no Bone Marrow (K562) 21371245
chr1 205248639 205249513 ZNF274 GTRD no Bone Marrow (K562) 21371246
chr1 205248643 205249907 ZNF143 GTRD no Epithelial (MCF-7) 21371247
chr1 205248661 205249624 ZNF274 GTRD no Bone Marrow (K562) 21371248
chr1 205248675 205250015 ZNF143 GTRD no Epithelial (MCF-7) 21371249
chr1 205248680 205249518 ZNF274 GTRD no Bone Marrow (K562) 21371250
chr1 205248754 205248766 YY1 JASPAR yes 34750626
chr1 205248756 205249464 ZNF274 GTRD no Bone Marrow (K562) 21371251
Genes associated with rs1779410[chr1:205248759], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More