EnhancerDB
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  3. rs17830999[chr14:50499943]
Enhancers that have rs17830999[chr14:50499943]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 50496383 50520083 enh15590
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs17830999[chr14:50499943]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 50499804 50500295 ZNF274 GTRD no Cervix (HeLa-S3) 21616128
chr14 50499840 50500225 ZNF274 GTRD no Liver (HepG2) 21616129
chr14 50499860 50500350 ZNF143 GTRD no Epithelial (MCF-7) 21616130
chr14 50499860 50500869 ZNF143 GTRD no Epithelial (MCF-7) 21616131
chr14 50499863 50500271 ZNF274 GTRD no Liver (HepG2) 21616132
chr14 50499869 50500194 ZNF274 GTRD no Bone Marrow (K562) 21616133
chr14 50499886 50500792 ZNF143 GTRD no Epithelial (MCF-7) 21616134
chr14 50499935 50499946 EBF1 JASPAR yes 115223371
Genes associated with rs17830999[chr14:50499943], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr14 50064193 50065882 - AL139099.1 ENSG00000253459.3 50065882 434061 Spleen 0.243379 13282