EnhancerDB
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  3. rs17842117[chr19:11059180]
Enhancers that have rs17842117[chr19:11059180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs17842117[chr19:11059180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11059171 11059186 IRF9 JASPAR yes 112448188
chr19 11059173 11059187 STAT1 JASPAR yes 112448189
chr19 11059173 11059188 STAT2 JASPAR yes 112448190
chr19 11059173 11059191 IRF2 JASPAR yes 112448191
Genes associated with rs17842117[chr19:11059180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More