EnhancerDB
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  3. rs17842778[chr17:49017589]
Enhancers that have rs17842778[chr17:49017589]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs17842778[chr17:49017589]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49014272 49017787 ZNF143 GTRD no Epithelial (MCF-7) 21771342
chr17 49014272 49017787 ZNF143 GTRD no Epithelial (MCF-7) 21771343
chr17 49016812 49017719 ZNF274 GTRD no Cervix (HeLa-S3) 21771396
chr17 49017252 49017868 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21771406
chr17 49017421 49017711 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21771408
chr17 49017461 49017801 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21771409
Genes associated with rs17842778[chr17:49017589], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More