EnhancerDB
  1. Home
  2. SNP
  3. rs180677452[chr1:224699156]
Enhancers that have rs180677452[chr1:224699156]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224679026 224701215 enh12719
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180677452[chr1:224699156]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224699150 224699161 GCM1 JASPAR yes 35709064
chr1 224699151 224699161 GCM2 JASPAR yes 35709065
chr1 224699155 224699166 USF1 JASPAR yes 35709066
chr1 224699155 224699166 USF2 JASPAR yes 35709067
chr1 224699156 224699166 MAX JASPAR yes 35709068
Genes associated with rs180677452[chr1:224699156], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More