EnhancerDB
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  3. rs180679188[chr19:10855972]
Enhancers that have rs180679188[chr19:10855972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs180679188[chr19:10855972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10855962 10855972 EVX1 JASPAR yes 112435180
chr19 10855962 10855972 MEOX2 JASPAR yes 112435181
chr19 10855966 10855980 ONECUT2 JASPAR yes 112435183
chr19 10855966 10855980 ONECUT3 JASPAR yes 112435184
chr19 10855966 10855981 IRF9 JASPAR yes 112435185
chr19 10855970 10855985 STAT2 JASPAR yes 112435186
Genes associated with rs180679188[chr19:10855972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More