EnhancerDB
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  3. rs180684060[chr1:225657963]
Enhancers that have rs180684060[chr1:225657963]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180684060[chr1:225657963]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225656960 225658230 P63 GTRD no Skin (Keratinocyte) 21385055
chr1 225657012 225657989 P63 GTRD no Skin (Keratinocyte) 21385056
chr1 225657019 225658105 P63 GTRD no Skin (Keratinocyte) 21385057
chr1 225657031 225658553 AR GTRD no Prostate (PC-3) 21385058
chr1 225657186 225658907 ZBTB33 GTRD no Brain (SK-N-SH) 21385060
chr1 225657232 225658611 ZBTB33 GTRD no Brain (SK-N-SH) 21385062
chr1 225657236 225658181 ZNF143 GTRD no Epithelial (MCF-7) 21385063
chr1 225657269 225658166 ZNF143 GTRD no Epithelial (MCF-7) 21385064
chr1 225657269 225658772 ZBTB33 GTRD no Brain (SK-N-SH) 21385065
chr1 225657283 225658602 ZBTB33 GTRD no Brain (SK-N-SH) 21385066
chr1 225657290 225658145 ZNF143 GTRD no Epithelial (MCF-7) 21385067
chr1 225657294 225658205 ZNF143 GTRD no Epithelial (MCF-7) 21385068
chr1 225657298 225658008 ZNF143 GTRD no Epithelial (MCF-7) 21385069
chr1 225657303 225658294 ZNF274 GTRD no Cervix (HeLa-S3) 21385070
chr1 225657313 225658294 ZNF274 GTRD no Cervix (HeLa-S3) 21385071
chr1 225657348 225658032 ZBTB33 GTRD no Brain (SK-N-SH) 21385072
chr1 225657351 225657999 ZNF143 GTRD no Epithelial (MCF-7) 21385073
chr1 225657354 225657968 ZNF143 GTRD no Epithelial (MCF-7) 21385074
chr1 225657354 225658070 ZNF274 GTRD no Cervix (HeLa-S3) 21385075
chr1 225657359 225658289 ZNF274 GTRD no Cervix (HeLa-S3) 21385076
chr1 225657362 225658020 ZNF143 GTRD no Epithelial (MCF-7) 21385077
chr1 225657368 225658065 ZBTB33 GTRD no Brain (SK-N-SH) 21385078
chr1 225657368 225658291 ZBTB33 GTRD no Brain (SK-N-SH) 21385079
chr1 225657376 225658180 ZNF274 GTRD no Cervix (HeLa-S3) 21385080
chr1 225657398 225658203 ZNF143 GTRD no Epithelial (MCF-7) 21385081
chr1 225657400 225658517 ZBTB33 GTRD no Brain (SK-N-SH) 21385082
chr1 225657402 225658535 ZBTB33 GTRD no Brain (SK-N-SH) 21385083
chr1 225657403 225658443 ZBTB33 GTRD no Brain (SK-N-SH) 21385084
chr1 225657408 225658620 ZBTB33 GTRD no Brain (SK-N-SH) 21385085
chr1 225657410 225658497 ZBTB33 GTRD no Brain (SK-N-SH) 21385086
chr1 225657417 225658455 ZBTB33 GTRD no Brain (SK-N-SH) 21385087
chr1 225657418 225658467 ZBTB33 GTRD no Brain (SK-N-SH) 21385090
chr1 225657425 225658321 TEF1 GTRD no Bone (Osteoblast) 21385091
chr1 225657430 225658079 ZNF143 GTRD no Epithelial (MCF-7) 21385092
chr1 225657430 225658194 ZNF274 GTRD no Cervix (HeLa-S3) 21385093
chr1 225657443 225658044 ZNF143 GTRD no Epithelial (MCF-7) 21385094
chr1 225657443 225658088 ZNF143 GTRD no Epithelial (MCF-7) 21385095
chr1 225657446 225658033 ZNF274 GTRD no Bone Marrow (K562) 21385096
chr1 225657447 225658156 ZNF274 GTRD no Bone Marrow (K562) 21385097
chr1 225657449 225658130 ZNF274 GTRD no Cervix (HeLa-S3) 21385098
chr1 225657452 225657984 ZNF274 GTRD no Cervix (HeLa-S3) 21385099
chr1 225657453 225658520 ZBTB33 GTRD no Brain (SK-N-SH) 21385100
chr1 225657454 225658331 ZNF274 GTRD no Cervix (HeLa-S3) 21385101
chr1 225657461 225658738 ZBTB33 GTRD no Brain (SK-N-SH) 21385102
chr1 225657471 225658193 ZNF274 GTRD no Cervix (HeLa-S3) 21385103
chr1 225657473 225658058 ZNF143 GTRD no Epithelial (MCF-7) 21385104
chr1 225657481 225658021 ZNF143 GTRD no Epithelial (MCF-7) 21385105
chr1 225657481 225658337 ZNF274 GTRD no Cervix (HeLa-S3) 21385106
chr1 225657491 225658039 ZBTB33 GTRD no Brain (SK-N-SH) 21385108
chr1 225657495 225658215 ZNF274 GTRD no Cervix (HeLa-S3) 21385109
chr1 225657501 225658122 ZNF143 GTRD no Epithelial (MCF-7) 21385110
chr1 225657501 225658322 ZBTB33 GTRD no Brain (SK-N-SH) 21385111
chr1 225657503 225658446 ZBTB33 GTRD no Brain (SK-N-SH) 21385112
chr1 225657525 225658014 ZNF274 GTRD no Bone Marrow (K562) 21385113
chr1 225657527 225657976 ZNF274 GTRD no Liver (HepG2) 21385114
chr1 225657530 225657971 ZNF143 GTRD no Epithelial (MCF-7) 21385115
chr1 225657535 225658045 ZNF143 GTRD no Epithelial (MCF-7) 21385116
chr1 225657551 225658385 ZBTB33 GTRD no Brain (SK-N-SH) 21385118
chr1 225657563 225657982 ZNF143 GTRD no Epithelial (MCF-7) 21385119
chr1 225657567 225658168 ZNF143 GTRD no Epithelial (MCF-7) 21385120
chr1 225657607 225657964 ZNF143 GTRD no Epithelial (MCF-7) 21385122
chr1 225657628 225658120 ZNF274 GTRD no Cervix (HeLa-S3) 21385124
chr1 225657649 225658157 ZNF143 GTRD no Epithelial (MCF-7) 21385126
Genes associated with rs180684060[chr1:225657963], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More