EnhancerDB
  1. Home
  2. SNP
  3. rs180708099[chr1:116887230]
Enhancers that have rs180708099[chr1:116887230]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116881229 116905675 enh581
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Stomach Muscle (A673) Thyroid Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs180708099[chr1:116887230]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116885464 116887313 P63 GTRD no Skin (Keratinocyte) 21332315
chr1 116885961 116887230 P63 GTRD no Skin (Keratinocyte) 21332316
chr1 116886126 116887251 P63 GTRD no Skin (Keratinocyte) 21332317
chr1 116886148 116887355 P63 GTRD no Skin (Keratinocyte) 21332318
chr1 116887213 116887232 CTCF JASPAR yes 31797867
chr1 116887218 116887230 TAL1 JASPAR yes 31797868
Genes associated with rs180708099[chr1:116887230], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More