EnhancerDB
  1. Home
  2. SNP
  3. rs180708602[chr16:89394398]
Enhancers that have rs180708602[chr16:89394398]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180708602[chr16:89394398]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89393784 89396777 AR GTRD no Prostate (PC-3) 21738244
chr16 89393784 89396777 AR GTRD no Prostate (PC-3) 108225702
chr16 89394392 89394401 GATA1 TRANSFAC yes 12331779
chr16 89394394 89394400 GATA3 JASPAR yes 12331780
Genes associated with rs180708602[chr16:89394398], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More