EnhancerDB
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  3. rs180720376[chr17:57920846]
Enhancers that have rs180720376[chr17:57920846]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57915645 57936791 enh17263
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180720376[chr17:57920846]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 107688742
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 108278238
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 21776393
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 107688870
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 108278239
chr17 57916673 57921496 ZNF143 GTRD no Epithelial (MCF-7) 21776429
chr17 57916673 57921496 ZNF143 GTRD no Epithelial (MCF-7) 107689020
chr17 57919204 57920984 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776532
chr17 57919830 57922162 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776546
chr17 57919863 57923596 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108278240
chr17 57919888 57921264 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776551
chr17 57920344 57921065 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776570
chr17 57920348 57921226 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776571
chr17 57920352 57921181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776572
chr17 57920353 57921119 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776573
chr17 57920382 57920967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776574
chr17 57920382 57920975 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776575
chr17 57920387 57921278 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776576
chr17 57920398 57920854 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776577
chr17 57920407 57920923 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776578
chr17 57920448 57920888 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776587
chr17 57920473 57921003 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776593
chr17 57920501 57920877 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776598
chr17 57920505 57920909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776601
chr17 57920508 57920848 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776603
chr17 57920508 57920868 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776604
chr17 57920529 57921033 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776608
chr17 57920542 57920872 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776611
chr17 57920555 57921151 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21776614
chr17 57920559 57920903 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776615
chr17 57920562 57920892 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776616
chr17 57920579 57921038 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776618
chr17 57920617 57921010 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776621
chr17 57920802 57921042 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776622
chr17 57920835 57920847 HNF1B JASPAR yes 55087800
Genes associated with rs180720376[chr17:57920846], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More