EnhancerDB
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  3. rs180728767[chr12:46860830]
Enhancers that have rs180728767[chr12:46860830]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs180728767[chr12:46860830]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46860725 46861001 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541782
chr12 46860818 46860832 SPI1 JASPAR yes 120625051
chr12 46860819 46860832 ELF1 JASPAR yes 120625052
chr12 46860820 46860841 IRF1 JASPAR yes 120625053
chr12 46860822 46860832 GABPA JASPAR yes 120625054
chr12 46860822 46860833 FLI1 JASPAR yes 120625055
chr12 46860823 46860831 FEV JASPAR yes 120625057
chr12 46860824 46860831 SPI1 JASPAR yes 120625058
chr12 46860824 46860839 PRDM1 JASPAR yes 120625059
Genes associated with rs180728767[chr12:46860830], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More