EnhancerDB
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  3. rs180783006[chr1:202004543]
Enhancers that have rs180783006[chr1:202004543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs180783006[chr1:202004543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202003959 202004652 TCF12 UCSC Txn Factor no Conserved 107857388
chr1 202003959 202004652 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857389
chr1 202003967 202004646 EP300 UCSC Txn Factor no Conserved 107857394
chr1 202003967 202004646 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857395
chr1 202004051 202004561 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365529
chr1 202004051 202004561 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857419
chr1 202004122 202004642 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107857422
chr1 202004302 202004758 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365532
chr1 202004428 202004784 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365533
Genes associated with rs180783006[chr1:202004543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More