EnhancerDB
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  3. rs180785487[chr16:89550526]
Enhancers that have rs180785487[chr16:89550526]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs180785487[chr16:89550526]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89550513 89550528 HNF4G JASPAR yes 12349711
chr16 89550514 89550528 NR2F1 JASPAR yes 12349712
chr16 89550514 89550528 RXRB JASPAR yes 12349713
chr16 89550514 89550528 RXRG JASPAR yes 12349714
Genes associated with rs180785487[chr16:89550526], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More