EnhancerDB
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  3. rs180837904[chr16:85590496]
Enhancers that have rs180837904[chr16:85590496]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180837904[chr16:85590496]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85586601 85591170 POLR2A UCSC Txn Factor no Conserved 108215987
chr16 85586601 85591170 POLR2A UCSC Txn Factor no Conserved 108215988
chr16 85587121 85591521 ZNF274 GTRD no Bone Marrow (K562) 21728824
chr16 85587121 85591521 ZNF274 GTRD no Bone Marrow (K562) 108216104
chr16 85587121 85591521 ZNF274 GTRD no Bone Marrow (K562) 108216105
chr16 85587462 85591088 ZNF274 GTRD no Bone Marrow (K562) 21728847
chr16 85589207 85591412 ZNF274 GTRD no Blood (GM12878) 108216124
chr16 85589355 85591118 ZNF274 GTRD no Cervix (HeLa-S3) 21729016
chr16 85589359 85594161 ZNF274 GTRD no Bone Marrow (K562) 21729017
chr16 85589359 85594161 ZNF274 GTRD no Bone Marrow (K562) 108216125
chr16 85589407 85590955 ZNF274 GTRD no Bone Marrow (K562) 21729020
chr16 85589471 85591222 ZNF274 GTRD no Bone Marrow (K562) 21729024
chr16 85589489 85590755 ZNF274 GTRD no Bone Marrow (K562) 21729026
chr16 85589503 85590913 ZNF274 GTRD no Bone Marrow (K562) 21729028
chr16 85589525 85590786 ZNF274 GTRD no Bone Marrow (K562) 21729030
chr16 85589899 85590569 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21729037
chr16 85589977 85591058 ZNF274 GTRD no Bone Marrow (K562) 21729041
chr16 85590064 85590504 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729044
chr16 85590080 85590795 ZNF274 GTRD no Bone Marrow (K562) 21729045
chr16 85590097 85590878 ZNF274 GTRD no Bone Marrow (K562) 21729046
chr16 85590119 85590509 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729047
chr16 85590119 85591370 MAX UCSC Txn Factor no Conserved 108216126
chr16 85590159 85590536 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729048
chr16 85590249 85590814 ZNF274 GTRD no Bone Marrow (K562) 21729049
chr16 85590252 85590628 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21729050
chr16 85590262 85590698 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729051
chr16 85590272 85590642 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729052
chr16 85590294 85590734 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729053
chr16 85590324 85590600 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21729055
chr16 85590331 85590695 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729056
chr16 85590344 85590620 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729057
chr16 85590344 85590654 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729058
chr16 85590345 85590715 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21729059
chr16 85590347 85590703 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21729060
chr16 85590353 85590583 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729061
chr16 85590359 85590603 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729062
chr16 85590360 85590636 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21729063
chr16 85590366 85590682 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21729064
chr16 85590413 85590817 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21729065
chr16 85590423 85590627 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729066
chr16 85590446 85590774 YY1 GTRD no Embryonic Stem Cell Line (H1-hESC) 21729067
Genes associated with rs180837904[chr16:85590496], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More