EnhancerDB
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  3. rs180840620[chr10:98779134]
Enhancers that have rs180840620[chr10:98779134]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 98778685 98792959 enh1451
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Ovary Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs180840620[chr10:98779134]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 98779129 98779134 SP1 TRANSFAC yes 129373746
chr10 98779130 98779135 SP1 TRANSFAC yes 129373747
chr10 98779133 98779138 SP1 TRANSFAC yes 129373748
chr10 98779134 98779139 SP1 TRANSFAC yes 129373749
chr10 98779134 98779143 HIC2 JASPAR yes 129373750
Genes associated with rs180840620[chr10:98779134], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More