EnhancerDB
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  3. rs180855485[chr1:54773127]
Enhancers that have rs180855485[chr1:54773127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs180855485[chr1:54773127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54773127 54773137 TBR1 JASPAR yes 28971370
chr1 54773127 54773138 TBX20 JASPAR yes 28971371
chr1 54773127 54773138 TBX2 JASPAR yes 28971372
Genes associated with rs180855485[chr1:54773127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More