EnhancerDB
  1. Home
  2. SNP
  3. rs180880142[chr17:76322621]
Enhancers that have rs180880142[chr17:76322621]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76316725 76355075 enh17407
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs180880142[chr17:76322621]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76322601 76322622 IRF1 JASPAR yes 56147474
chr17 76322606 76322621 FOXP1 JASPAR yes 56147475
chr17 76322606 76322627 IRF1 JASPAR yes 56147476
chr17 76322607 76322622 FOXP1 JASPAR yes 56147477
chr17 76322608 76322623 FOXP1 JASPAR yes 56147478
chr17 76322609 76322624 FOXP1 JASPAR yes 56147479
chr17 76322612 76322627 FOXP1 JASPAR yes 56147480
Genes associated with rs180880142[chr17:76322621], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More