EnhancerDB
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  3. rs180887383[chr12:125042619]
Enhancers that have rs180887383[chr12:125042619]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs180887383[chr12:125042619]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125042608 125042624 RFX2 JASPAR yes 124393796
chr12 125042608 125042624 RFX3 JASPAR yes 124393797
chr12 125042608 125042624 RFX4 JASPAR yes 124393798
chr12 125042608 125042624 RFX5 JASPAR yes 124393799
chr12 125042609 125042628 RFX2 JASPAR yes 124393800
chr12 125042611 125042626 RFX5 JASPAR yes 124393801
chr12 125042611 125042631 ESR1 JASPAR yes 124393802
chr12 125042615 125042633 ESR2 JASPAR yes 124393803
chr12 125042616 125042631 ESR2 JASPAR yes 124393804
chr12 125042617 125042621 ESR1 TRANSFAC yes 124393805
Genes associated with rs180887383[chr12:125042619], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More