EnhancerDB
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  3. rs180899713[chr5:90604607]
Enhancers that have rs180899713[chr5:90604607]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 90604425 90604632 vista48442
VISTA
Transcript factors that have rs180899713[chr5:90604607]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90604588 90604609 IRF1 JASPAR yes 64191106
chr5 90604588 90604609 IRF1 JASPAR yes 70682254
chr5 90604592 90604613 IRF1 JASPAR yes 64191107
chr5 90604592 90604613 IRF1 JASPAR yes 70682255
chr5 90604598 90604619 IRF1 JASPAR yes 64191108
chr5 90604598 90604619 IRF1 JASPAR yes 70682256
chr5 90604600 90604615 PRDM1 JASPAR yes 64191109
chr5 90604600 90604615 PRDM1 JASPAR yes 70682257
chr5 90604602 90604623 IRF1 JASPAR yes 64191110
chr5 90604602 90604623 IRF1 JASPAR yes 70682258
chr5 90604604 90604619 PRDM1 JASPAR yes 64191111
chr5 90604604 90604619 STAT2 JASPAR yes 64191112
chr5 90604604 90604619 PRDM1 JASPAR yes 70682259
chr5 90604604 90604619 STAT2 JASPAR yes 70682260
chr5 90604605 90604619 SPIC JASPAR yes 64191113
chr5 90604605 90604619 STAT1 JASPAR yes 64191114
chr5 90604605 90604619 SPIC JASPAR yes 70682261
chr5 90604605 90604619 STAT1 JASPAR yes 70682262
chr5 90604606 90604627 IRF1 JASPAR yes 64191115
chr5 90604606 90604627 IRF1 JASPAR yes 70682263
chr5 90604607 90604622 FOXP1 JASPAR yes 64191116
chr5 90604607 90604622 FOXP1 JASPAR yes 70682264
chr5 90604607 90604628 IRF1 JASPAR yes 64191117
chr5 90604607 90604628 IRF1 JASPAR yes 70682265
Genes associated with rs180899713[chr5:90604607], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More