EnhancerDB
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  3. rs180923389[chr1:154722136]
Enhancers that have rs180923389[chr1:154722136]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154711786 154726515 enh27142
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs180923389[chr1:154722136]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154722132 154722147 TFAP2C JASPAR yes 32307129
chr1 154722134 154722146 TFAP2A JASPAR yes 32307130
chr1 154722134 154722146 TFAP2B JASPAR yes 32307131
chr1 154722134 154722146 TFAP2C JASPAR yes 32307132
chr1 154722134 154722148 EBF1 JASPAR yes 32307133
chr1 154722134 154722149 TFAP2A JASPAR yes 32307134
chr1 154722135 154722146 EBF1 JASPAR yes 32307135
Genes associated with rs180923389[chr1:154722136], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More