EnhancerDB
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  3. rs180945522[chr1:235017003]
Enhancers that have rs180945522[chr1:235017003]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs180945522[chr1:235017003]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235005645 235020264 ZNF274 GTRD no Blood (GM12878) 21399330
chr1 235005645 235020264 ZNF274 GTRD no Blood (GM12878) 107883399
chr1 235005645 235020264 ZNF274 GTRD no Blood (GM12878) 107883400
chr1 235005645 235020264 ZNF274 GTRD no Blood (GM12878) 107883401
chr1 235005645 235020264 ZNF274 GTRD no Blood (GM12878) 107883402
chr1 235007988 235019755 ZNF274 GTRD no Blood (GM12878) 21399384
chr1 235007988 235019755 ZNF274 GTRD no Blood (GM12878) 107883412
chr1 235007988 235019755 ZNF274 GTRD no Blood (GM12878) 107883413
chr1 235007988 235019755 ZNF274 GTRD no Blood (GM12878) 107883414
chr1 235007988 235019755 ZNF274 GTRD no Blood (GM12878) 107883415
chr1 235014181 235017040 ZNF274 GTRD no Blood (GM12878) 21399771
chr1 235016772 235017036 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21399818
chr1 235016955 235018839 P63 GTRD no Skin (Keratinocyte) 21399819
chr1 235016955 235018839 P63 GTRD no Skin (Keratinocyte) 107883943
chr1 235016961 235020685 ZNF274 GTRD no Blood (GM12878) 21399820
chr1 235016961 235020685 ZNF274 GTRD no Blood (GM12878) 107883944
chr1 235016999 235017011 FOXC2 JASPAR yes 36325193
chr1 235016999 235017013 FOXF2 JASPAR yes 36325194
chr1 235017000 235017011 FOXB1 JASPAR yes 36325195
chr1 235017000 235017011 FOXC1 JASPAR yes 36325196
chr1 235017001 235017005 YY1 TRANSFAC yes 36325197
chr1 235017003 235017519 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21399821
chr1 235017003 235017519 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107883945
Genes associated with rs180945522[chr1:235017003], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More